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Association of Biomolecular Resource Facilities Logo

Bioinformatics Software Engineer

Association of Biomolecular Resource Facilities

Salary not specified
Oct 3, 2025
San Francisco, CA, US
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ATR International is seeking a Bioinformatics Software Engineer to help develop a next-generation computational platform for antibody-based therapeutic design and assessment

Requirements

  • Strong front-end development skills (React, JavaScript, HTML/CSS)
  • Experience with cloud platforms (AWS, GCP) and containerization (Docker)
  • Proficiency in Python, with hands-on experience in FastAPI, SQL/NoSQL databases, and modern web frameworks
  • Experience building automated computational pipelines for scientific applications
  • Familiarity with molecular modeling tools (MOE, Schrödinger, or similar)
  • Knowledge of antibody engineering and developability assessment
  • Prior experience in biotech or pharmaceutical industry settings

Responsibilities

  • Design and implement scalable, web-based interfaces for antibody and multispecific modeling workflows
  • Develop and optimize database schemas for managing molecular modeling data and metadata
  • Build and maintain FastAPI-based backend services to support computational pipelines
  • Integrate molecular modeling tools (e.g., MOE, Schrödinger) into automated workflows
  • Collaborate with scientists and data scientists to translate research needs into robust software solutions
  • Ensure code quality through modular design, documentation, and maintainability
  • Support platform deployment and testing in cloud-based environments

Other

  • Master’s or PhD in Computer Science, Bioinformatics, Computational Biology, Physics, or related field with 2–3 years of experience
  • Excellent communication and teamwork skills
  • Understanding of protein structure, antibody design, or biophysics (a plus)