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Machine Learning Scientist/Sr. Scientist - Drug Target Discovery

Systimmune

$100,000 - $180,000
Dec 5, 2025
Redmond, WA, US
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SystImmune is expanding its AI and computational discovery team to identify novel drug targets and design next-generation therapeutics for cancer treatment.

Requirements

  • Demonstrated application of ML/AI to therapeutic R&D (e.g., gene expression modeling, target nomination, protein interaction prediction).
  • Hands-on proficiency with Python, R, PyTorch or TensorFlow, and related bioinformatics/ML tools.
  • Experience with multi-modal data integration, including single-cell, bulk RNA-seq, proteomics, or clinical data.
  • Exposure to protein structure modeling or antibody engineering is highly desirable.
  • Prior work on T cell engagers, ADC programs, or bispecific antibodies.
  • Understanding of protein-ligand interactions, payload selection, or immune checkpoint design.
  • Knowledge of tools such as AlphaFold, Rosetta, DiffDock, or protein language models.

Responsibilities

  • Develop and apply ML/AI methods to identify and prioritize novel drug targets, including T cell engagers, ADCs, and multispecific antibodies.
  • Engineer and optimize therapeutic strategies using ML models, including payload strategies and checkpoint combinations for cancer indications.
  • Build scalable and interpretable machine learning models (e.g., DL, VAEs, GNNs) using public and internal multi-omics, structural, and clinical datasets.
  • Analyze complex datasets (RNA-seq, proteomics, perturbation, clinical trial data) to generate actionable insights into cancer biology and treatment response.
  • Interpret outputs from ML models and guide experimental validation, providing insight into feasibility, mechanistic pathways, and therapeutic relevance.

Other

  • 5+ years of industry experience in drug discovery or therapeutic development required.
  • Strong experience with drug development platforms, ideally including target selection/validation and biologic modality development (ADC, TCE, antibodies).
  • Familiarity with oncology-focused discovery, especially involving immune checkpoints, payload strategies, or tumor-specific targets.
  • PhD or Master’s in Computer Science, Machine Learning, Computational Biology, Bioinformatics, Biostatistics, or a related field.
  • The opportunity to directly impact first-in-class cancer immunotherapies.